Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.89□□□□□ -0.03
RORAP35398 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.89□□□□□ -0.03
RORAP35398 AL136379.1-201ENST00000623471 2642 ntBASIC14.89□□□□□ -0.03
RORAP35398 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.89□□□□□ -0.03
RORAP35398 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.89□□□□□ -0.03
RORAP35398 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.89□□□□□ -0.03
RORAP35398 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.89□□□□□ -0.03
RORAP35398 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.89□□□□□ -0.03
RORAP35398 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.89□□□□□ -0.03
RORAP35398 AC015936.2-201ENST00000593177 259 ntBASIC14.89□□□□□ -0.03
RORAP35398 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RORAP35398 AC008735.3-201ENST00000596646 500 ntBASIC14.89□□□□□ -0.03
RORAP35398 AC010319.3-201ENST00000597028 470 ntBASIC14.89□□□□□ -0.03
RORAP35398 MIR6752-201ENST00000618442 71 ntBASIC14.89□□□□□ -0.03
RORAP35398 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RORAP35398 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.89□□□□□ -0.03
RORAP35398 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.89□□□□□ -0.03
RORAP35398 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RORAP35398 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.88□□□□□ -0.03
RORAP35398 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.88□□□□□ -0.03
RORAP35398 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.88□□□□□ -0.03
RORAP35398 AC018892.3-201ENST00000623986 2499 ntBASIC14.88□□□□□ -0.03
RORAP35398 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.88□□□□□ -0.03
RORAP35398 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.88□□□□□ -0.03
RORAP35398 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.88□□□□□ -0.03
RORAP35398 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RORAP35398 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
RORAP35398 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RORAP35398 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.88□□□□□ -0.03
RORAP35398 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.88□□□□□ -0.03
RORAP35398 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.88□□□□□ -0.03
RORAP35398 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.88□□□□□ -0.03
RORAP35398 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.88□□□□□ -0.03
RORAP35398 RAB43P1-201ENST00000561790 589 ntBASIC14.88□□□□□ -0.03
RORAP35398 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.88□□□□□ -0.03
RORAP35398 AC133539.2-201ENST00000604757 467 ntBASIC14.88□□□□□ -0.03
RORAP35398 AC017083.2-201ENST00000608069 979 ntBASIC14.88□□□□□ -0.03
RORAP35398 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RORAP35398 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RORAP35398 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.88□□□□□ -0.03
RORAP35398 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RORAP35398 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms