Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.56■□□□□ 0.24
CHRNA3P32297 AC127383.1-201ENST00000444697 1800 ntBASIC16.56■□□□□ 0.24
CHRNA3P32297 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA3P32297 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA3P32297 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.56■□□□□ 0.24
CHRNA3P32297 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CHRNA3P32297 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA3P32297 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA3P32297 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
CHRNA3P32297 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA3P32297 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHRNA3P32297 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.56■□□□□ 0.24
CHRNA3P32297 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
CHRNA3P32297 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CHRNA3P32297 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.55■□□□□ 0.24
CHRNA3P32297 BNIP3P1-202ENST00000550043 1585 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.55■□□□□ 0.24
CHRNA3P32297 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.55■□□□□ 0.24
CHRNA3P32297 AGAP7P-201ENST00000582299 2062 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 AGAP14-201ENST00000624701 2060 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.55■□□□□ 0.24
CHRNA3P32297 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 AC007292.2-201ENST00000593524 1812 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.55■□□□□ 0.24
CHRNA3P32297 TREML5P-201ENST00000421694 576 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.55■□□□□ 0.24
CHRNA3P32297 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.55■□□□□ 0.24
CHRNA3P32297 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.55■□□□□ 0.24
CHRNA3P32297 RNA5SP410-201ENST00000516285 106 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.55■□□□□ 0.24
CHRNA3P32297 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 AL009178.2-201ENST00000597278 2719 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.55■□□□□ 0.24
CHRNA3P32297 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 REXO1L1P-202ENST00000608646 1974 ntBASIC16.55■□□□□ 0.24
CHRNA3P32297 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHRNA3P32297 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.55■□□□□ 0.24
CHRNA3P32297 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRNA3P32297 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHRNA3P32297 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA3P32297 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA3P32297 FO538757.1-201ENST00000623083 1397 ntBASIC16.54■□□□□ 0.24
CHRNA3P32297 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRNA3P32297 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRNA3P32297 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRNA3P32297 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA3P32297 AC093214.1-201ENST00000511688 1107 ntBASIC16.54■□□□□ 0.24
CHRNA3P32297 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 AC069120.2-201ENST00000524091 540 ntBASIC16.54■□□□□ 0.24
CHRNA3P32297 SPCS2P1-201ENST00000561636 679 ntBASIC16.54■□□□□ 0.24
CHRNA3P32297 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA3P32297 AC061975.2-201ENST00000581722 295 ntBASIC16.54■□□□□ 0.24
CHRNA3P32297 AC024267.1-201ENST00000582320 895 ntBASIC16.54■□□□□ 0.24
CHRNA3P32297 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA3P32297 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA3P32297 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.54■□□□□ 0.24
CHRNA3P32297 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.54■□□□□ 0.24
CHRNA3P32297 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA3P32297 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.54■□□□□ 0.24
CHRNA3P32297 AC007967.4-201ENST00000614700 386 ntBASIC16.54■□□□□ 0.24
CHRNA3P32297 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 CICP23-201ENST00000605013 2741 ntBASIC16.54■□□□□ 0.24
CHRNA3P32297 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHRNA3P32297 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHRNA3P32297 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.54■□□□□ 0.24
CHRNA3P32297 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms