Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40LGP29965 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CD40LGP29965 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40LGP29965 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 AC012615.1-201ENST00000565797 1299 ntBASIC13.95□□□□□ -0.18
CD40LGP29965 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CD40LGP29965 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40LGP29965 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CD40LGP29965 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40LGP29965 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
CD40LGP29965 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40LGP29965 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40LGP29965 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 AL590787.1-201ENST00000568856 1315 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40LGP29965 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CD40LGP29965 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.94□□□□□ -0.18
CD40LGP29965 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.94□□□□□ -0.18
CD40LGP29965 AL020989.1-201ENST00000422979 469 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 HCG4P8-203ENST00000443049 980 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CD40LGP29965 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CD40LGP29965 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 AC074051.2-201ENST00000565115 352 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CD40LGP29965 AC005336.2-201ENST00000593183 939 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 AL591122.2-201ENST00000624125 1853 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD40LGP29965 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40LGP29965 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40LGP29965 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD40LGP29965 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.94□□□□□ -0.18
CD40LGP29965 WASH3P-207ENST00000560956 1394 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 AC233702.3-201ENST00000578656 1387 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 FO538757.1-201ENST00000623083 1397 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 MTHFR-210ENST00000641407 2387 ntBASIC13.94□□□□□ -0.18
CD40LGP29965 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40LGP29965 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms