Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.97■□□□□ 0.79
RXRBP28702 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.97■□□□□ 0.79
RXRBP28702 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RXRBP28702 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RXRBP28702 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RXRBP28702 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC19.96■□□□□ 0.79
RXRBP28702 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 AC067852.2-201ENST00000590513 2313 ntBASIC19.96■□□□□ 0.79
RXRBP28702 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.96■□□□□ 0.79
RXRBP28702 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 HLA-DMA-203ENST00000395305 777 ntBASIC19.96■□□□□ 0.79
RXRBP28702 RN7SKP175-201ENST00000408472 289 ntBASIC19.96■□□□□ 0.79
RXRBP28702 BANF1P3-201ENST00000412556 261 ntBASIC19.96■□□□□ 0.79
RXRBP28702 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC19.96■□□□□ 0.79
RXRBP28702 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.96■□□□□ 0.79
RXRBP28702 FTH1P22-201ENST00000456305 520 ntBASIC19.96■□□□□ 0.79
RXRBP28702 PGAM1P12-201ENST00000505622 748 ntBASIC19.96■□□□□ 0.79
RXRBP28702 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RXRBP28702 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.96■□□□□ 0.79
RXRBP28702 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.96■□□□□ 0.79
RXRBP28702 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.96■□□□□ 0.79
RXRBP28702 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.96■□□□□ 0.79
RXRBP28702 AC005962.1-201ENST00000584100 773 ntBASIC19.96■□□□□ 0.79
RXRBP28702 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.96■□□□□ 0.79
RXRBP28702 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.96■□□□□ 0.79
RXRBP28702 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.96■□□□□ 0.79
RXRBP28702 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RXRBP28702 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.95■□□□□ 0.79
RXRBP28702 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.95■□□□□ 0.78
RXRBP28702 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
RXRBP28702 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC19.95■□□□□ 0.78
RXRBP28702 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.95■□□□□ 0.78
RXRBP28702 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 LINC01815-202ENST00000641468 1409 ntBASIC19.95■□□□□ 0.78
RXRBP28702 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RXRBP28702 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.95■□□□□ 0.78
RXRBP28702 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 RPSAP15-201ENST00000448168 861 ntBASIC19.95■□□□□ 0.78
RXRBP28702 AC023906.1-201ENST00000486386 453 ntBASIC19.95■□□□□ 0.78
RXRBP28702 CISD2-202ENST00000503643 808 ntTSL 2 BASIC19.95■□□□□ 0.78
RXRBP28702 RPS23-204ENST00000507980 836 ntTSL 2 BASIC19.95■□□□□ 0.78
RXRBP28702 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 AC009884.2-201ENST00000603110 324 ntBASIC19.95■□□□□ 0.78
RXRBP28702 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.95■□□□□ 0.78
RXRBP28702 HCG11-201ENST00000411553 5696 ntBASIC19.95■□□□□ 0.78
RXRBP28702 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RXRBP28702 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.95■□□□□ 0.78
RXRBP28702 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RXRBP28702 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.95■□□□□ 0.78
RXRBP28702 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RXRBP28702 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RXRBP28702 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RXRBP28702 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.94■□□□□ 0.78
RXRBP28702 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC19.94■□□□□ 0.78
RXRBP28702 RN7SL494P-201ENST00000461517 304 ntBASIC19.94■□□□□ 0.78
RXRBP28702 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.94■□□□□ 0.78
RXRBP28702 AC083801.1-201ENST00000491689 358 ntBASIC19.94■□□□□ 0.78
RXRBP28702 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.94■□□□□ 0.78
RXRBP28702 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.94■□□□□ 0.78
RXRBP28702 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.94■□□□□ 0.78
RXRBP28702 RPS5-204ENST00000598098 536 ntTSL 2 BASIC19.94■□□□□ 0.78
RXRBP28702 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC19.94■□□□□ 0.78
RXRBP28702 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.94■□□□□ 0.78
RXRBP28702 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC19.94■□□□□ 0.78
RXRBP28702 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RXRBP28702 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms