Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GDF1P27539 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.19□□□□□ -0.14
GDF1P27539 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
GDF1P27539 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.19□□□□□ -0.14
GDF1P27539 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
GDF1P27539 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GDF1P27539 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 AL162726.2-201ENST00000438986 1017 ntBASIC14.19□□□□□ -0.14
GDF1P27539 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.19□□□□□ -0.14
GDF1P27539 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 BRI3BPP1-201ENST00000594224 787 ntBASIC14.19□□□□□ -0.14
GDF1P27539 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.19□□□□□ -0.14
GDF1P27539 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.19□□□□□ -0.14
GDF1P27539 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.19□□□□□ -0.14
GDF1P27539 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.19□□□□□ -0.14
GDF1P27539 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GDF1P27539 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GDF1P27539 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 KRT8P22-201ENST00000562317 1415 ntBASIC14.18□□□□□ -0.14
GDF1P27539 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GDF1P27539 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 SOCS2P1-201ENST00000417727 557 ntBASIC14.18□□□□□ -0.14
GDF1P27539 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.18□□□□□ -0.14
GDF1P27539 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.18□□□□□ -0.14
GDF1P27539 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
GDF1P27539 VDAC1P7-201ENST00000462417 847 ntBASIC14.18□□□□□ -0.14
GDF1P27539 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.18□□□□□ -0.14
GDF1P27539 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.18□□□□□ -0.14
GDF1P27539 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 AC015910.1-201ENST00000579400 975 ntBASIC14.18□□□□□ -0.14
GDF1P27539 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.18□□□□□ -0.14
GDF1P27539 AC000095.1-201ENST00000603208 874 ntBASIC14.18□□□□□ -0.14
GDF1P27539 CU634019.7-201ENST00000624153 1185 ntBASIC14.18□□□□□ -0.14
GDF1P27539 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 FP236241.2-201ENST00000624906 1185 ntBASIC14.18□□□□□ -0.14
GDF1P27539 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GDF1P27539 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GDF1P27539 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GDF1P27539 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.18□□□□□ -0.14
GDF1P27539 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms