Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMLP26374 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHMLP26374 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMLP26374 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 AC138969.3-201ENST00000546612 1459 ntBASIC18.84■□□□□ 0.61
CHMLP26374 AC138932.2-201ENST00000548268 1459 ntBASIC18.84■□□□□ 0.61
CHMLP26374 AC126755.4-201ENST00000549796 1459 ntBASIC18.84■□□□□ 0.61
CHMLP26374 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.83■□□□□ 0.61
CHMLP26374 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMLP26374 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMLP26374 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMLP26374 CICP24-201ENST00000605464 2705 ntBASIC18.83■□□□□ 0.61
CHMLP26374 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMLP26374 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHMLP26374 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.83■□□□□ 0.61
CHMLP26374 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMLP26374 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMLP26374 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.83■□□□□ 0.61
CHMLP26374 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMLP26374 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMLP26374 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMLP26374 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMLP26374 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHMLP26374 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.83■□□□□ 0.6
CHMLP26374 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.83■□□□□ 0.6
CHMLP26374 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.83■□□□□ 0.6
CHMLP26374 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMLP26374 KRT18P43-201ENST00000469825 1281 ntBASIC18.83■□□□□ 0.6
CHMLP26374 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMLP26374 AC004890.2-204ENST00000481968 304 ntBASIC18.83■□□□□ 0.6
CHMLP26374 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.83■□□□□ 0.6
CHMLP26374 SPDYE18-201ENST00000510091 1050 ntBASIC18.83■□□□□ 0.6
CHMLP26374 IGHV3-42-201ENST00000520410 361 ntBASIC18.83■□□□□ 0.6
CHMLP26374 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHMLP26374 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMLP26374 AC025181.2-201ENST00000606994 802 ntBASIC18.83■□□□□ 0.6
CHMLP26374 AC008738.7-201ENST00000609744 511 ntBASIC18.83■□□□□ 0.6
CHMLP26374 AC093512.1-201ENST00000617969 520 ntBASIC18.83■□□□□ 0.6
CHMLP26374 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMLP26374 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMLP26374 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CHMLP26374 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CHMLP26374 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CHMLP26374 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMLP26374 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMLP26374 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMLP26374 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMLP26374 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMLP26374 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMLP26374 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHMLP26374 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHMLP26374 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMLP26374 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMLP26374 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMLP26374 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMLP26374 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMLP26374 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMLP26374 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMLP26374 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHMLP26374 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMLP26374 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.82■□□□□ 0.6
CHMLP26374 AL589987.1-201ENST00000453380 819 ntBASIC18.82■□□□□ 0.6
CHMLP26374 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMLP26374 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.82■□□□□ 0.6
CHMLP26374 AL390754.1-201ENST00000619088 582 ntBASIC18.82■□□□□ 0.6
CHMLP26374 AC004840.1-201ENST00000636359 365 ntBASIC18.82■□□□□ 0.6
CHMLP26374 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CHMLP26374 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMLP26374 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMLP26374 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMLP26374 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHMLP26374 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHMLP26374 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMLP26374 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMLP26374 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMLP26374 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMLP26374 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMLP26374 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 ZBED1P1-201ENST00000502364 1930 ntBASIC18.81■□□□□ 0.6
CHMLP26374 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CHMLP26374 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMLP26374 GHSR-202ENST00000427970 912 ntBASIC18.81■□□□□ 0.6
CHMLP26374 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.81■□□□□ 0.6
CHMLP26374 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMLP26374 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMLP26374 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.81■□□□□ 0.6
CHMLP26374 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMLP26374 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMLP26374 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CHMLP26374 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMLP26374 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms