Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.23□□□□□ -0.29
COL8A2P25067 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 TTTY23B-201ENST00000442790 549 ntBASIC13.23□□□□□ -0.29
COL8A2P25067 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.23□□□□□ -0.29
COL8A2P25067 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.23□□□□□ -0.29
COL8A2P25067 AL359711.2-201ENST00000563105 872 ntBASIC13.23□□□□□ -0.29
COL8A2P25067 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
COL8A2P25067 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.23□□□□□ -0.29
COL8A2P25067 AL008721.1-201ENST00000609964 604 ntBASIC13.23□□□□□ -0.29
COL8A2P25067 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.23□□□□□ -0.29
COL8A2P25067 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
COL8A2P25067 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
COL8A2P25067 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
COL8A2P25067 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
COL8A2P25067 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.22□□□□□ -0.29
COL8A2P25067 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
COL8A2P25067 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.22□□□□□ -0.29
COL8A2P25067 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.22□□□□□ -0.29
COL8A2P25067 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
COL8A2P25067 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.22□□□□□ -0.29
COL8A2P25067 BRI3BPP1-201ENST00000594224 787 ntBASIC13.22□□□□□ -0.29
COL8A2P25067 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
COL8A2P25067 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.22□□□□□ -0.29
COL8A2P25067 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.22□□□□□ -0.29
COL8A2P25067 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.22□□□□□ -0.29
COL8A2P25067 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
COL8A2P25067 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
COL8A2P25067 KRT8P22-201ENST00000562317 1415 ntBASIC13.22□□□□□ -0.29
COL8A2P25067 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms