Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.32□□□□□ -0.28
VAMP1P23763 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
VAMP1P23763 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.32□□□□□ -0.28
VAMP1P23763 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.32□□□□□ -0.28
VAMP1P23763 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.32□□□□□ -0.28
VAMP1P23763 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.32□□□□□ -0.28
VAMP1P23763 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.32□□□□□ -0.28
VAMP1P23763 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.32□□□□□ -0.28
VAMP1P23763 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.32□□□□□ -0.28
VAMP1P23763 AP000867.3-201ENST00000524675 377 ntBASIC13.32□□□□□ -0.28
VAMP1P23763 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VAMP1P23763 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.32□□□□□ -0.28
VAMP1P23763 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.32□□□□□ -0.28
VAMP1P23763 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.32□□□□□ -0.28
VAMP1P23763 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.32□□□□□ -0.28
VAMP1P23763 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.32□□□□□ -0.28
VAMP1P23763 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VAMP1P23763 AC004706.3-202ENST00000621574 984 ntBASIC13.32□□□□□ -0.28
VAMP1P23763 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.32□□□□□ -0.28
VAMP1P23763 AL805961.1-202ENST00000641562 540 ntBASIC13.32□□□□□ -0.28
VAMP1P23763 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.32□□□□□ -0.28
VAMP1P23763 AC023024.2-201ENST00000623561 1993 ntBASIC13.32□□□□□ -0.28
VAMP1P23763 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
VAMP1P23763 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VAMP1P23763 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VAMP1P23763 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VAMP1P23763 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VAMP1P23763 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
VAMP1P23763 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.31□□□□□ -0.28
VAMP1P23763 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.31□□□□□ -0.28
VAMP1P23763 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms