Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 AC010336.2-201ENST00000564226 506 ntBASIC15.67■□□□□ 0.1
XRCC1P18887 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.67■□□□□ 0.1
XRCC1P18887 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
XRCC1P18887 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
XRCC1P18887 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
XRCC1P18887 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.67■□□□□ 0.1
XRCC1P18887 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.67■□□□□ 0.1
XRCC1P18887 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
XRCC1P18887 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.67■□□□□ 0.1
XRCC1P18887 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
XRCC1P18887 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
XRCC1P18887 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
XRCC1P18887 SERBP1P5-201ENST00000510079 1181 ntBASIC15.66■□□□□ 0.1
XRCC1P18887 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.66■□□□□ 0.1
XRCC1P18887 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.66■□□□□ 0.1
XRCC1P18887 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.66■□□□□ 0.1
XRCC1P18887 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.66■□□□□ 0.1
XRCC1P18887 AL512361.1-201ENST00000554200 418 ntBASIC15.66■□□□□ 0.1
XRCC1P18887 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.66■□□□□ 0.1
XRCC1P18887 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.66■□□□□ 0.1
XRCC1P18887 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
XRCC1P18887 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
XRCC1P18887 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC1P18887 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
XRCC1P18887 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
XRCC1P18887 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
XRCC1P18887 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.65■□□□□ 0.1
XRCC1P18887 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
XRCC1P18887 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
XRCC1P18887 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC1P18887 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 COX20P2-201ENST00000452636 358 ntBASIC15.65■□□□□ 0.1
XRCC1P18887 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC1P18887 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms