Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.66□□□□□ -0.06
CCL4P13236 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL4P13236 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.66□□□□□ -0.06
CCL4P13236 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL4P13236 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL4P13236 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL4P13236 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 LINC02199-201ENST00000506655 2702 ntBASIC14.66□□□□□ -0.06
CCL4P13236 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL4P13236 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCL4P13236 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCL4P13236 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL4P13236 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL4P13236 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL4P13236 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL4P13236 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CCL4P13236 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL4P13236 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.65□□□□□ -0.06
CCL4P13236 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.65□□□□□ -0.06
CCL4P13236 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.65□□□□□ -0.06
CCL4P13236 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL4P13236 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
CCL4P13236 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL4P13236 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL4P13236 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL4P13236 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.65□□□□□ -0.06
CCL4P13236 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL4P13236 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL4P13236 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL4P13236 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL4P13236 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL4P13236 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL4P13236 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL4P13236 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
CCL4P13236 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCL4P13236 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.64□□□□□ -0.07
CCL4P13236 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCL4P13236 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL4P13236 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.64□□□□□ -0.07
CCL4P13236 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCL4P13236 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CCL4P13236 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CCL4P13236 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 TPM3P8-201ENST00000330554 643 ntBASIC14.64□□□□□ -0.07
CCL4P13236 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.64□□□□□ -0.07
CCL4P13236 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCL4P13236 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL4P13236 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.64□□□□□ -0.07
CCL4P13236 MTX1P1-201ENST00000440904 838 ntBASIC14.64□□□□□ -0.07
CCL4P13236 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL4P13236 RPSAP36-202ENST00000494591 1261 ntBASIC14.64□□□□□ -0.07
CCL4P13236 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.64□□□□□ -0.07
CCL4P13236 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CCL4P13236 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.64□□□□□ -0.07
CCL4P13236 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL4P13236 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.64□□□□□ -0.07
CCL4P13236 AC005695.3-201ENST00000614522 232 ntBASIC14.64□□□□□ -0.07
CCL4P13236 AL008638.5-201ENST00000623814 1298 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms