Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH1P12830 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH1P12830 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH1P12830 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.31■□□□□ 0.04
CDH1P12830 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.31■□□□□ 0.04
CDH1P12830 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH1P12830 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH1P12830 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.31■□□□□ 0.04
CDH1P12830 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH1P12830 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDH1P12830 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDH1P12830 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 AC087481.3-201ENST00000602886 1894 ntBASIC15.31■□□□□ 0.04
CDH1P12830 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDH1P12830 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDH1P12830 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.31■□□□□ 0.04
CDH1P12830 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDH1P12830 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDH1P12830 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH1P12830 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH1P12830 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH1P12830 RFPL4AP1-201ENST00000530883 850 ntBASIC15.3■□□□□ 0.04
CDH1P12830 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 AL512361.1-201ENST00000554200 418 ntBASIC15.3■□□□□ 0.04
CDH1P12830 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH1P12830 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CDH1P12830 AC097359.3-201ENST00000603982 1210 ntBASIC15.3■□□□□ 0.04
CDH1P12830 MIR6069-201ENST00000620069 79 ntBASIC15.3■□□□□ 0.04
CDH1P12830 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH1P12830 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH1P12830 AL033527.5-202ENST00000641632 1098 ntBASIC15.3■□□□□ 0.04
CDH1P12830 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH1P12830 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH1P12830 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH1P12830 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH1P12830 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CDH1P12830 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 AC092127.1-201ENST00000567093 3455 ntBASIC15.29■□□□□ 0.04
CDH1P12830 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH1P12830 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH1P12830 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH1P12830 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH1P12830 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms