Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TOP1P11387 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 COX5BP8-201ENST00000416911 349 ntBASIC18.39■□□□□ 0.53
TOP1P11387 AC005034.1-201ENST00000426657 489 ntBASIC18.39■□□□□ 0.53
TOP1P11387 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 GAPDHP21-201ENST00000450301 1010 ntBASIC18.39■□□□□ 0.53
TOP1P11387 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.39■□□□□ 0.53
TOP1P11387 CR383656.12-201ENST00000549567 513 ntBASIC18.39■□□□□ 0.53
TOP1P11387 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 AC068418.2-201ENST00000577309 3703 ntBASIC18.39■□□□□ 0.53
TOP1P11387 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TOP1P11387 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.39■□□□□ 0.53
TOP1P11387 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
TOP1P11387 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TOP1P11387 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.38■□□□□ 0.53
TOP1P11387 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.38■□□□□ 0.53
TOP1P11387 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TOP1P11387 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.38■□□□□ 0.53
TOP1P11387 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.38■□□□□ 0.53
TOP1P11387 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TOP1P11387 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 AP006294.1-201ENST00000415407 339 ntBASIC18.38■□□□□ 0.53
TOP1P11387 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.38■□□□□ 0.53
TOP1P11387 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.38■□□□□ 0.53
TOP1P11387 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.38■□□□□ 0.53
TOP1P11387 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.38■□□□□ 0.53
TOP1P11387 AL035252.4-201ENST00000624174 288 ntBASIC18.38■□□□□ 0.53
TOP1P11387 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TOP1P11387 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.38■□□□□ 0.53
TOP1P11387 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TOP1P11387 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TOP1P11387 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.38■□□□□ 0.53
TOP1P11387 DBET-201ENST00000630918 3363 ntBASIC18.38■□□□□ 0.53
TOP1P11387 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.38■□□□□ 0.53
TOP1P11387 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TOP1P11387 CU639417.3-201ENST00000624240 1404 ntBASIC18.38■□□□□ 0.53
TOP1P11387 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TOP1P11387 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TOP1P11387 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TOP1P11387 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TOP1P11387 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TOP1P11387 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TOP1P11387 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms