Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.8□□□□□ -0.2
UBCP0CG48 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.8□□□□□ -0.2
UBCP0CG48 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
UBCP0CG48 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.8□□□□□ -0.2
UBCP0CG48 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 SPDYE11-202ENST00000450699 704 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 KRT18P3-201ENST00000451602 1288 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 IGHV3-62-201ENST00000520057 340 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 KRT8P23-201ENST00000560090 1207 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 AP000842.3-202ENST00000569238 1080 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 SPDYE9P-201ENST00000570642 692 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.8□□□□□ -0.2
UBCP0CG48 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 SPDYE10P-202ENST00000612005 668 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 SPDYE8P-202ENST00000612377 668 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
UBCP0CG48 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 AC148477.4-201ENST00000613430 1793 ntBASIC13.8□□□□□ -0.2
UBCP0CG48 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBCP0CG48 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
UBCP0CG48 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.8□□□□□ -0.2
UBCP0CG48 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UBCP0CG48 MIR346-201ENST00000362234 95 ntBASIC13.79□□□□□ -0.2
UBCP0CG48 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 AL590627.1-203ENST00000421194 1026 ntBASIC13.79□□□□□ -0.2
UBCP0CG48 ADH5P3-201ENST00000433842 1137 ntBASIC13.79□□□□□ -0.2
UBCP0CG48 FAM58CP-201ENST00000435741 640 ntBASIC13.79□□□□□ -0.2
UBCP0CG48 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.79□□□□□ -0.2
UBCP0CG48 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 AC140113.2-201ENST00000604370 208 ntBASIC13.79□□□□□ -0.2
UBCP0CG48 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 AC106881.1-201ENST00000605849 3329 ntBASIC13.79□□□□□ -0.2
UBCP0CG48 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UBCP0CG48 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.79□□□□□ -0.2
UBCP0CG48 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBCP0CG48 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBCP0CG48 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBCP0CG48 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms