Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SFTPBP07988 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SFTPBP07988 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SFTPBP07988 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
SFTPBP07988 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.71□□□□□ -0.22
SFTPBP07988 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SFTPBP07988 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.71□□□□□ -0.22
SFTPBP07988 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SFTPBP07988 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.71□□□□□ -0.22
SFTPBP07988 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.71□□□□□ -0.22
SFTPBP07988 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.7□□□□□ -0.22
SFTPBP07988 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SFTPBP07988 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SFTPBP07988 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.7□□□□□ -0.22
SFTPBP07988 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.7□□□□□ -0.22
SFTPBP07988 FAM86C2P-203ENST00000528684 1004 ntBASIC13.7□□□□□ -0.22
SFTPBP07988 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SFTPBP07988 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.7□□□□□ -0.22
SFTPBP07988 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SFTPBP07988 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.7□□□□□ -0.22
SFTPBP07988 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.7□□□□□ -0.22
SFTPBP07988 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.7□□□□□ -0.22
SFTPBP07988 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SFTPBP07988 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SFTPBP07988 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SFTPBP07988 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SFTPBP07988 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 AC136621.1-201ENST00000624017 2304 ntBASIC13.69□□□□□ -0.22
SFTPBP07988 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 AP001282.1-201ENST00000531301 1499 ntBASIC13.69□□□□□ -0.22
SFTPBP07988 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 SSR4P1-203ENST00000599569 2260 ntBASIC13.69□□□□□ -0.22
SFTPBP07988 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 AC126335.2-201ENST00000623362 4637 ntBASIC13.69□□□□□ -0.22
SFTPBP07988 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.69□□□□□ -0.22
SFTPBP07988 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms