Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
HMGCRP04035 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCRP04035 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HMGCRP04035 AC091046.1-201ENST00000331871 207 ntBASIC17.52■□□□□ 0.4
HMGCRP04035 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HMGCRP04035 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
HMGCRP04035 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
HMGCRP04035 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.52■□□□□ 0.4
HMGCRP04035 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.52■□□□□ 0.4
HMGCRP04035 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 MAGEA5-201ENST00000446757 942 ntBASIC17.52■□□□□ 0.4
HMGCRP04035 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCRP04035 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.52■□□□□ 0.4
HMGCRP04035 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.52■□□□□ 0.4
HMGCRP04035 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.52■□□□□ 0.4
HMGCRP04035 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.52■□□□□ 0.4
HMGCRP04035 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
HMGCRP04035 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 AC244157.2-201ENST00000616239 1006 ntBASIC17.52■□□□□ 0.4
HMGCRP04035 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGCRP04035 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCRP04035 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCRP04035 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCRP04035 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCRP04035 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
HMGCRP04035 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
HMGCRP04035 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCRP04035 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCRP04035 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HMGCRP04035 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 MIR33B-201ENST00000385104 96 ntBASIC17.51■□□□□ 0.39
HMGCRP04035 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
HMGCRP04035 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.51■□□□□ 0.39
HMGCRP04035 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HMGCRP04035 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.51■□□□□ 0.39
HMGCRP04035 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
HMGCRP04035 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 AC114812.1-204ENST00000449669 728 ntBASIC17.51■□□□□ 0.39
HMGCRP04035 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HMGCRP04035 AC044849.1-201ENST00000519737 1188 ntBASIC17.51■□□□□ 0.39
HMGCRP04035 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGCRP04035 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGCRP04035 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCRP04035 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCRP04035 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCRP04035 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCRP04035 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCRP04035 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCRP04035 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCRP04035 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCRP04035 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCRP04035 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGCRP04035 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCRP04035 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCRP04035 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HMGCRP04035 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGCRP04035 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
HMGCRP04035 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
HMGCRP04035 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HMGCRP04035 AC104457.1-201ENST00000401024 814 ntBASIC17.5■□□□□ 0.39
HMGCRP04035 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCRP04035 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCRP04035 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCRP04035 NKAIN1P1-201ENST00000435754 582 ntBASIC17.5■□□□□ 0.39
HMGCRP04035 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCRP04035 SPTLC1P5-201ENST00000450718 252 ntBASIC17.5■□□□□ 0.39
HMGCRP04035 SERPINA13P-202ENST00000478994 924 ntBASIC17.5■□□□□ 0.39
HMGCRP04035 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCRP04035 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGCRP04035 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HMGCRP04035 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCRP04035 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCRP04035 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCRP04035 AC005052.1-201ENST00000625181 2492 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms