Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMP1P01033 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.65■□□□□ 0.26
TIMP1P01033 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMP1P01033 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TIMP1P01033 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TIMP1P01033 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TIMP1P01033 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.64■□□□□ 0.26
TIMP1P01033 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.64■□□□□ 0.25
TIMP1P01033 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TIMP1P01033 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TIMP1P01033 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TIMP1P01033 PDIA3P2-201ENST00000428073 158 ntBASIC16.64■□□□□ 0.25
TIMP1P01033 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.64■□□□□ 0.25
TIMP1P01033 FGFR3P1-201ENST00000449999 601 ntBASIC16.64■□□□□ 0.25
TIMP1P01033 MESTP3-201ENST00000503460 968 ntBASIC16.64■□□□□ 0.25
TIMP1P01033 IGLV3-15-201ENST00000518356 244 ntBASIC16.64■□□□□ 0.25
TIMP1P01033 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMP1P01033 PGAM1P5-201ENST00000548011 764 ntBASIC16.64■□□□□ 0.25
TIMP1P01033 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMP1P01033 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.64■□□□□ 0.25
TIMP1P01033 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
TIMP1P01033 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TIMP1P01033 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMP1P01033 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TIMP1P01033 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TIMP1P01033 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.64■□□□□ 0.25
TIMP1P01033 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TIMP1P01033 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.63■□□□□ 0.25
TIMP1P01033 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TIMP1P01033 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TIMP1P01033 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
TIMP1P01033 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.63■□□□□ 0.25
TIMP1P01033 RTN3P1-201ENST00000536295 711 ntBASIC16.63■□□□□ 0.25
TIMP1P01033 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.63■□□□□ 0.25
TIMP1P01033 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.63■□□□□ 0.25
TIMP1P01033 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TIMP1P01033 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TIMP1P01033 AC018695.7-201ENST00000624587 2492 ntBASIC16.63■□□□□ 0.25
TIMP1P01033 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TIMP1P01033 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TIMP1P01033 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TIMP1P01033 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TIMP1P01033 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TIMP1P01033 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TIMP1P01033 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms