Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TNFRSF6BO95407 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 KRT16P4-201ENST00000453883 522 ntBASIC11.44□□□□□ -0.58
TNFRSF6BO95407 MIR4515-201ENST00000584082 81 ntBASIC11.44□□□□□ -0.58
TNFRSF6BO95407 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 AC069148.1-201ENST00000608741 768 ntBASIC11.44□□□□□ -0.58
TNFRSF6BO95407 AL121956.5-201ENST00000625261 221 ntBASIC11.44□□□□□ -0.58
TNFRSF6BO95407 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 BEND3P1-201ENST00000421591 1944 ntBASIC11.44□□□□□ -0.58
TNFRSF6BO95407 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 AC018892.3-201ENST00000623986 2499 ntBASIC11.44□□□□□ -0.58
TNFRSF6BO95407 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
TNFRSF6BO95407 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 AC079781.5-202ENST00000641784 3743 ntBASIC11.43□□□□□ -0.58
TNFRSF6BO95407 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 BX640514.1-201ENST00000583223 1918 ntBASIC11.43□□□□□ -0.58
TNFRSF6BO95407 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 AC010327.5-201ENST00000586923 3061 ntBASIC11.43□□□□□ -0.58
TNFRSF6BO95407 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.43□□□□□ -0.58
TNFRSF6BO95407 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms