Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.78■□□□□ 0.44
SMC2O95347 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMC2O95347 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.78■□□□□ 0.44
SMC2O95347 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMC2O95347 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SMC2O95347 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SMC2O95347 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.78■□□□□ 0.44
SMC2O95347 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.78■□□□□ 0.44
SMC2O95347 MIR940-201ENST00000401276 94 ntBASIC17.78■□□□□ 0.44
SMC2O95347 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.78■□□□□ 0.44
SMC2O95347 EEF1DP4-201ENST00000446006 880 ntBASIC17.78■□□□□ 0.44
SMC2O95347 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.78■□□□□ 0.44
SMC2O95347 TIMM8BP1-201ENST00000452384 211 ntBASIC17.78■□□□□ 0.44
SMC2O95347 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.78■□□□□ 0.44
SMC2O95347 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.78■□□□□ 0.44
SMC2O95347 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.78■□□□□ 0.44
SMC2O95347 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.78■□□□□ 0.44
SMC2O95347 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.78■□□□□ 0.44
SMC2O95347 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.78■□□□□ 0.44
SMC2O95347 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.78■□□□□ 0.44
SMC2O95347 AL121894.2-201ENST00000602977 491 ntBASIC17.78■□□□□ 0.44
SMC2O95347 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.78■□□□□ 0.44
SMC2O95347 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.78■□□□□ 0.44
SMC2O95347 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.78■□□□□ 0.44
SMC2O95347 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMC2O95347 UXT-AS1-201ENST00000590504 1525 ntBASIC17.77■□□□□ 0.44
SMC2O95347 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SMC2O95347 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SMC2O95347 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMC2O95347 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.77■□□□□ 0.44
SMC2O95347 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
SMC2O95347 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMC2O95347 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMC2O95347 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SMC2O95347 AL645939.2-201ENST00000427340 991 ntBASIC17.77■□□□□ 0.44
SMC2O95347 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.77■□□□□ 0.44
SMC2O95347 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMC2O95347 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.77■□□□□ 0.44
SMC2O95347 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.77■□□□□ 0.44
SMC2O95347 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.77■□□□□ 0.44
SMC2O95347 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.77■□□□□ 0.44
SMC2O95347 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.77■□□□□ 0.44
SMC2O95347 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.77■□□□□ 0.44
SMC2O95347 C20orf181-201ENST00000623918 480 ntBASIC17.77■□□□□ 0.44
SMC2O95347 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.77■□□□□ 0.44
SMC2O95347 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SMC2O95347 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMC2O95347 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.77■□□□□ 0.43
SMC2O95347 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMC2O95347 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMC2O95347 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMC2O95347 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMC2O95347 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMC2O95347 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SMC2O95347 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
SMC2O95347 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.76■□□□□ 0.43
SMC2O95347 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 AP3S2-216ENST00000617003 1561 ntBASIC17.76■□□□□ 0.43
SMC2O95347 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SMC2O95347 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.76■□□□□ 0.43
SMC2O95347 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.76■□□□□ 0.43
SMC2O95347 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
SMC2O95347 AC084121.4-201ENST00000641598 221 ntBASIC17.76■□□□□ 0.43
SMC2O95347 AF228730.8-201ENST00000642140 221 ntBASIC17.76■□□□□ 0.43
SMC2O95347 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMC2O95347 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.76■□□□□ 0.43
SMC2O95347 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms