Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PDCD6O75340 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PDCD6O75340 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PDCD6O75340 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PDCD6O75340 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
PDCD6O75340 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PDCD6O75340 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.26□□□□□ -0.29
PDCD6O75340 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.26□□□□□ -0.29
PDCD6O75340 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
PDCD6O75340 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.26□□□□□ -0.29
PDCD6O75340 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.26□□□□□ -0.29
PDCD6O75340 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 AC106881.1-201ENST00000605849 3329 ntBASIC13.26□□□□□ -0.29
PDCD6O75340 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PDCD6O75340 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PDCD6O75340 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PDCD6O75340 AL136379.1-201ENST00000623471 2642 ntBASIC13.26□□□□□ -0.29
PDCD6O75340 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
PDCD6O75340 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PDCD6O75340 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.25□□□□□ -0.29
PDCD6O75340 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.25□□□□□ -0.29
PDCD6O75340 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.25□□□□□ -0.29
PDCD6O75340 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 AL365209.1-201ENST00000624418 6473 ntBASIC13.25□□□□□ -0.29
PDCD6O75340 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
PDCD6O75340 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.25□□□□□ -0.29
PDCD6O75340 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PDCD6O75340 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 MKNK2P1-201ENST00000437526 628 ntBASIC13.25□□□□□ -0.29
PDCD6O75340 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
PDCD6O75340 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
PDCD6O75340 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.25□□□□□ -0.29
PDCD6O75340 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 ZBED1P1-201ENST00000502364 1930 ntBASIC13.25□□□□□ -0.29
PDCD6O75340 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.25□□□□□ -0.29
PDCD6O75340 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
PDCD6O75340 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PDCD6O75340 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.25□□□□□ -0.29
PDCD6O75340 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms