Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DLX3O60479 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.37■□□□□ 0.05
DLX3O60479 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
DLX3O60479 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
DLX3O60479 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.37■□□□□ 0.05
DLX3O60479 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.37■□□□□ 0.05
DLX3O60479 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.37■□□□□ 0.05
DLX3O60479 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
DLX3O60479 SPDYE17-201ENST00000412399 783 ntBASIC15.37■□□□□ 0.05
DLX3O60479 FAM58DP-201ENST00000428076 619 ntBASIC15.37■□□□□ 0.05
DLX3O60479 AL353705.2-201ENST00000428243 662 ntBASIC15.37■□□□□ 0.05
DLX3O60479 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.37■□□□□ 0.05
DLX3O60479 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
DLX3O60479 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
DLX3O60479 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.37■□□□□ 0.05
DLX3O60479 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.37■□□□□ 0.05
DLX3O60479 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 AC022145.2-201ENST00000598203 171 ntBASIC15.37■□□□□ 0.05
DLX3O60479 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.37■□□□□ 0.05
DLX3O60479 AC105339.1-204ENST00000636249 355 ntBASIC15.37■□□□□ 0.05
DLX3O60479 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
DLX3O60479 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.37■□□□□ 0.05
DLX3O60479 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
DLX3O60479 AC068587.6-202ENST00000641839 5619 ntBASIC15.37■□□□□ 0.05
DLX3O60479 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
DLX3O60479 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 AC007191.1-201ENST00000623179 2995 ntBASIC15.36■□□□□ 0.05
DLX3O60479 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
DLX3O60479 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
DLX3O60479 FO393414.2-201ENST00000405153 598 ntBASIC15.36■□□□□ 0.05
DLX3O60479 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 POLD2P1-201ENST00000511220 997 ntBASIC15.36■□□□□ 0.05
DLX3O60479 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 MTDHP5-201ENST00000598980 586 ntBASIC15.36■□□□□ 0.05
DLX3O60479 AC018529.1-201ENST00000613063 361 ntBASIC15.36■□□□□ 0.05
DLX3O60479 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
DLX3O60479 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.36■□□□□ 0.05
DLX3O60479 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
DLX3O60479 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
DLX3O60479 WASH3P-207ENST00000560956 1394 ntBASIC15.36■□□□□ 0.05
DLX3O60479 FO538757.1-201ENST00000623083 1397 ntBASIC15.36■□□□□ 0.05
DLX3O60479 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
DLX3O60479 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
DLX3O60479 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DLX3O60479 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DLX3O60479 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms