Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC007274.1-201ENST00000439805 662 ntBASIC16.94■□□□□ 0.3
EXTL3O43909 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.94■□□□□ 0.3
EXTL3O43909 AC123567.1-201ENST00000548294 1261 ntBASIC16.94■□□□□ 0.3
EXTL3O43909 AC027307.3-201ENST00000594262 1100 ntBASIC16.94■□□□□ 0.3
EXTL3O43909 AL008721.1-201ENST00000609964 604 ntBASIC16.94■□□□□ 0.3
EXTL3O43909 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.94■□□□□ 0.3
EXTL3O43909 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.94■□□□□ 0.3
EXTL3O43909 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
EXTL3O43909 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.94■□□□□ 0.3
EXTL3O43909 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EXTL3O43909 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 CICP6-201ENST00000457191 2729 ntBASIC16.93■□□□□ 0.3
EXTL3O43909 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.93■□□□□ 0.3
EXTL3O43909 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.93■□□□□ 0.3
EXTL3O43909 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.93■□□□□ 0.3
EXTL3O43909 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.93■□□□□ 0.3
EXTL3O43909 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.93■□□□□ 0.3
EXTL3O43909 AC104596.2-201ENST00000512793 793 ntBASIC16.93■□□□□ 0.3
EXTL3O43909 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.93■□□□□ 0.3
EXTL3O43909 AL596325.1-201ENST00000563991 1082 ntBASIC16.93■□□□□ 0.3
EXTL3O43909 SPDYE22P-201ENST00000582158 798 ntBASIC16.93■□□□□ 0.3
EXTL3O43909 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.93■□□□□ 0.3
EXTL3O43909 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.93■□□□□ 0.3
EXTL3O43909 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.93■□□□□ 0.3
EXTL3O43909 AL358472.5-202ENST00000641448 1267 ntBASIC16.93■□□□□ 0.3
EXTL3O43909 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
EXTL3O43909 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.93■□□□□ 0.3
EXTL3O43909 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EXTL3O43909 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
EXTL3O43909 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
EXTL3O43909 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EXTL3O43909 AC112693.3-201ENST00000624819 1983 ntBASIC16.93■□□□□ 0.3
EXTL3O43909 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.93■□□□□ 0.3
EXTL3O43909 AC022532.1-201ENST00000624563 1728 ntBASIC16.93■□□□□ 0.3
EXTL3O43909 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
EXTL3O43909 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
EXTL3O43909 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
EXTL3O43909 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
EXTL3O43909 PPT1-215ENST00000641471 2368 ntBASIC16.92■□□□□ 0.3
EXTL3O43909 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EXTL3O43909 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.92■□□□□ 0.3
EXTL3O43909 AC098850.1-201ENST00000419919 790 ntBASIC16.92■□□□□ 0.3
EXTL3O43909 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.92■□□□□ 0.3
EXTL3O43909 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EXTL3O43909 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.92■□□□□ 0.3
EXTL3O43909 CR383656.12-201ENST00000549567 513 ntBASIC16.92■□□□□ 0.3
EXTL3O43909 AC140912.1-201ENST00000577171 1054 ntBASIC16.92■□□□□ 0.3
EXTL3O43909 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
EXTL3O43909 AC007431.3-201ENST00000623221 587 ntBASIC16.92■□□□□ 0.3
EXTL3O43909 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.92■□□□□ 0.3
EXTL3O43909 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EXTL3O43909 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EXTL3O43909 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EXTL3O43909 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EXTL3O43909 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.91■□□□□ 0.3
EXTL3O43909 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXTL3O43909 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms