Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.81□□□□□ -0.52
SNAI2O43623 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.81□□□□□ -0.52
SNAI2O43623 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SNAI2O43623 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SNAI2O43623 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.81□□□□□ -0.52
SNAI2O43623 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.81□□□□□ -0.52
SNAI2O43623 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 AC005562.1-201ENST00000583030 3219 ntBASIC11.81□□□□□ -0.52
SNAI2O43623 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SNAI2O43623 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.81□□□□□ -0.52
SNAI2O43623 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.81□□□□□ -0.52
SNAI2O43623 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.8□□□□□ -0.52
SNAI2O43623 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.8□□□□□ -0.52
SNAI2O43623 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SNAI2O43623 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.8□□□□□ -0.52
SNAI2O43623 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.8□□□□□ -0.52
SNAI2O43623 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SNAI2O43623 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 MRPL20P1-201ENST00000400819 433 ntBASIC11.8□□□□□ -0.52
SNAI2O43623 HMGA1P7-201ENST00000406908 502 ntBASIC11.8□□□□□ -0.52
SNAI2O43623 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.8□□□□□ -0.52
SNAI2O43623 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.8□□□□□ -0.52
SNAI2O43623 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.8□□□□□ -0.52
SNAI2O43623 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.8□□□□□ -0.52
SNAI2O43623 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.8□□□□□ -0.52
SNAI2O43623 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.8□□□□□ -0.52
SNAI2O43623 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SNAI2O43623 AL121772.3-201ENST00000610840 674 ntBASIC11.8□□□□□ -0.52
SNAI2O43623 ACTL9-202ENST00000612068 1252 ntBASIC11.8□□□□□ -0.52
SNAI2O43623 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.8□□□□□ -0.52
SNAI2O43623 REXO1L6P-202ENST00000619970 1078 ntBASIC11.8□□□□□ -0.52
SNAI2O43623 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.8□□□□□ -0.52
SNAI2O43623 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms