Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.39■□□□□ 0.21
SOX1O00570 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX1O00570 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.39■□□□□ 0.21
SOX1O00570 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX1O00570 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.39■□□□□ 0.21
SOX1O00570 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.39■□□□□ 0.21
SOX1O00570 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX1O00570 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.39■□□□□ 0.21
SOX1O00570 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.39■□□□□ 0.21
SOX1O00570 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
SOX1O00570 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SOX1O00570 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SOX1O00570 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SOX1O00570 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SOX1O00570 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
SOX1O00570 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX1O00570 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX1O00570 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX1O00570 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX1O00570 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SOX1O00570 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX1O00570 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX1O00570 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
SOX1O00570 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SOX1O00570 AL138688.1-201ENST00000624851 1594 ntBASIC16.38■□□□□ 0.21
SOX1O00570 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 IL9RP3-201ENST00000442856 1674 ntBASIC16.38■□□□□ 0.21
SOX1O00570 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SOX1O00570 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SOX1O00570 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SOX1O00570 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.38■□□□□ 0.21
SOX1O00570 BCAS2P2-201ENST00000425064 674 ntBASIC16.38■□□□□ 0.21
SOX1O00570 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.38■□□□□ 0.21
SOX1O00570 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SOX1O00570 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.38■□□□□ 0.21
SOX1O00570 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 AC005618.3-201ENST00000624928 458 ntBASIC16.38■□□□□ 0.21
SOX1O00570 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.38■□□□□ 0.21
SOX1O00570 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX1O00570 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX1O00570 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX1O00570 AC090502.4-201ENST00000551714 1386 ntBASIC16.38■□□□□ 0.21
SOX1O00570 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
SOX1O00570 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX1O00570 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SOX1O00570 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.37■□□□□ 0.21
SOX1O00570 AL592076.1-201ENST00000424448 303 ntBASIC16.37■□□□□ 0.21
SOX1O00570 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 AC023141.7-201ENST00000430646 407 ntBASIC16.37■□□□□ 0.21
SOX1O00570 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX1O00570 AC100827.2-201ENST00000563214 1194 ntBASIC16.37■□□□□ 0.21
SOX1O00570 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.37■□□□□ 0.21
SOX1O00570 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX1O00570 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
SOX1O00570 AC092299.1-201ENST00000632679 757 ntBASIC16.37■□□□□ 0.21
SOX1O00570 AC002472.4-201ENST00000641915 272 ntBASIC16.37■□□□□ 0.21
SOX1O00570 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SOX1O00570 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX1O00570 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX1O00570 AL133373.2-201ENST00000623187 2828 ntBASIC16.37■□□□□ 0.21
SOX1O00570 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX1O00570 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX1O00570 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms