Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPB9F8W1W9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 CICP11-201ENST00000434745 2827 ntBASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 AC104794.3-201ENST00000566840 1248 ntBASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 AC099063.4-201ENST00000641099 1602 ntBASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
NPIPB9F8W1W9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NPIPB9F8W1W9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 AL512638.1-201ENST00000457493 794 ntBASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.27□□□□□ -0.13
NPIPB9F8W1W9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms