Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
USP17L11C9JVI0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP17L11C9JVI0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP17L11C9JVI0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
USP17L11C9JVI0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP17L11C9JVI0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP17L11C9JVI0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP17L11C9JVI0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP17L11C9JVI0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 RPL13AP20-201ENST00000459725 609 ntBASIC18.05■□□□□ 0.48
USP17L11C9JVI0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 AC009542.2-202ENST00000619004 1067 ntBASIC18.05■□□□□ 0.48
USP17L11C9JVI0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP17L11C9JVI0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 AL139384.1-201ENST00000612143 3047 ntBASIC18.04■□□□□ 0.48
USP17L11C9JVI0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 KRT18P25-201ENST00000508931 1278 ntBASIC18.04■□□□□ 0.48
USP17L11C9JVI0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 AC023310.1-201ENST00000554836 735 ntBASIC18.04■□□□□ 0.48
USP17L11C9JVI0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 RN7SL560P-201ENST00000577943 264 ntBASIC18.04■□□□□ 0.48
USP17L11C9JVI0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP17L11C9JVI0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms