Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 KRT18P3-201ENST00000451602 1288 ntBASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 BX640515.1-201ENST00000617215 977 ntBASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 LINC00528-201ENST00000600723 2160 ntBASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC104581.4-201ENST00000623126 3052 ntBASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC091951.1-201ENST00000512854 2465 ntBASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PTENP1-202ENST00000532280 3996 ntBASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC011477.6-201ENST00000604980 1927 ntBASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 AP001282.1-201ENST00000531301 1499 ntBASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF103-CHMP3A0A140T963 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF103-CHMP3A0A140T963 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms