Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 AC012508.2-201ENST00000567613 1472 ntBASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 TSPY13P-201ENST00000338964 914 ntBASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 AC113404.2-201ENST00000507884 177 ntBASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 AC104390.1-201ENST00000555663 520 ntBASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 TERF1P2-201ENST00000583350 1212 ntBASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 PCDHGB8P-201ENST00000502926 1973 ntBASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 PTPRVP-205ENST00000641549 5067 ntBASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.12
LINC01558Q9Y6Z2 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AL138709.1-201ENST00000614840 1693 ntBASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 HAUS4P1-201ENST00000406739 1145 ntBASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AC091390.4-202ENST00000476426 537 ntBASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms