Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 AC092127.1-201ENST00000567093 3455 ntBASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHB1Q9Y5F3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 SSR4P1-203ENST00000599569 2260 ntBASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 AL607033.1-201ENST00000623900 1599 ntBASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 RAB43P1-201ENST00000561790 589 ntBASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 AC127383.1-201ENST00000444697 1800 ntBASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHB1Q9Y5F3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 AC090616.6-203ENST00000579186 1945 ntBASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 AC092384.3-202ENST00000564646 2873 ntBASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHB1Q9Y5F3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms