Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 RPS18P9-201ENST00000482817 460 ntBASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 ALG1L3P-201ENST00000503331 765 ntBASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
RIMBP3Q9UFD9 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 ZBTB45P1-201ENST00000452761 1456 ntBASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 FAM197Y6-201ENST00000420524 766 ntBASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 AL137077.2-201ENST00000635124 1608 ntBASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RIMBP3Q9UFD9 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 AC113347.2-201ENST00000512350 279 ntBASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 AC012508.2-201ENST00000567613 1472 ntBASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 BAX-205ENST00000391871 687 ntTSL 5 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 BCRP4-201ENST00000506079 804 ntBASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 HERC2P11-201ENST00000562845 725 ntBASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 AC100756.2-201ENST00000569537 736 ntBASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 PHF23-213ENST00000613632 850 ntTSL 5 BASIC23.92■■□□□ 1.42
RIMBP3Q9UFD9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 AL138725.1-201ENST00000407347 1314 ntBASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 ERP29P1-201ENST00000442902 706 ntBASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 SOD2-205ENST00000444946 917 ntTSL 2 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 TRMT112P3-201ENST00000580149 358 ntBASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 AC067852.2-201ENST00000590513 2313 ntBASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RIMBP3Q9UFD9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RIMBP3Q9UFD9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms