Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 AC134915.1-201ENST00000426461 574 ntBASIC19■□□□□ 0.63
HMG20BQ9P0W2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 AC007389.4-201ENST00000454674 793 ntBASIC19■□□□□ 0.63
HMG20BQ9P0W2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 AC120045.2-201ENST00000567334 178 ntBASIC19■□□□□ 0.63
HMG20BQ9P0W2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 AC022532.1-201ENST00000624563 1728 ntBASIC19■□□□□ 0.63
HMG20BQ9P0W2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HMG20BQ9P0W2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 AC008735.3-201ENST00000596646 500 ntBASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 AL162274.1-201ENST00000617191 1098 ntBASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 CU634019.7-201ENST00000624153 1185 ntBASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 FP236241.2-201ENST00000624906 1185 ntBASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 CICP13-201ENST00000422015 2789 ntBASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMG20BQ9P0W2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 ARSEP1-201ENST00000420443 635 ntBASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 AC112492.5-201ENST00000421897 457 ntBASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 HILS1-202ENST00000545329 423 ntBASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 DRD5P1-201ENST00000456605 1438 ntBASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMG20BQ9P0W2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HMG20BQ9P0W2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms