Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 RPSAP36-202ENST00000494591 1261 ntBASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 AP001258.2-201ENST00000529891 490 ntBASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 AL008638.5-201ENST00000623814 1298 ntBASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 AL354989.2-201ENST00000435838 1540 ntBASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 MTX1P1-201ENST00000440904 838 ntBASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 AC114812.1-204ENST00000449669 728 ntBASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HCFC1R1Q9NWW0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 LTB4R2-202ENST00000528054 3092 ntBASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 AP006547.1-201ENST00000563435 692 ntBASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.1■□□□□ 0.17
HCFC1R1Q9NWW0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms