Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 GOLGA8CP-201ENST00000446144 5237 ntBASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 KRT8P22-201ENST00000562317 1415 ntBASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 RARRES2P10-201ENST00000564312 460 ntBASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 AC124319.4-201ENST00000622931 2161 ntBASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 AL353732.1-201ENST00000569618 1459 ntBASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CDC42SE1Q9NRR8 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 AC060814.4-201ENST00000594169 2163 ntBASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms