Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 FTH1P14-201ENST00000482930 551 ntBASIC16.82■□□□□ 0.28
NXF3Q9H4D5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 AP005117.1-202ENST00000581724 1908 ntBASIC16.82■□□□□ 0.28
NXF3Q9H4D5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC084364.1-201ENST00000551967 1556 ntBASIC16.81■□□□□ 0.28
NXF3Q9H4D5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC093525.8-201ENST00000624099 1342 ntBASIC16.81■□□□□ 0.28
NXF3Q9H4D5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 KLF2P4-201ENST00000451959 1225 ntBASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 BNIP3P42-201ENST00000454982 569 ntBASIC16.81■□□□□ 0.28
NXF3Q9H4D5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 GNRHR2-203ENST00000581100 1187 ntBASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 BNIP3P29-201ENST00000598302 571 ntBASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC244669.2-201ENST00000612320 853 ntBASIC16.81■□□□□ 0.28
NXF3Q9H4D5 AC011447.5-201ENST00000616168 564 ntBASIC16.81■□□□□ 0.28
NXF3Q9H4D5 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NXF3Q9H4D5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.8■□□□□ 0.28
NXF3Q9H4D5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms