Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 SPDYE17-201ENST00000412399 783 ntBASIC14.48□□□□□ -0.09
TRIM2Q9C040 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 AC109322.1-201ENST00000524499 1264 ntBASIC14.48□□□□□ -0.09
TRIM2Q9C040 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 HNRNPUP1-201ENST00000554987 333 ntBASIC14.48□□□□□ -0.09
TRIM2Q9C040 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 AC097359.3-201ENST00000603982 1210 ntBASIC14.48□□□□□ -0.09
TRIM2Q9C040 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 AC007967.4-201ENST00000614700 386 ntBASIC14.48□□□□□ -0.09
TRIM2Q9C040 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM2Q9C040 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM2Q9C040 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 AC144831.1-201ENST00000573312 2656 ntBASIC14.47□□□□□ -0.09
TRIM2Q9C040 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 AZGP1P1-201ENST00000411909 902 ntBASIC14.47□□□□□ -0.09
TRIM2Q9C040 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 AL596257.1-201ENST00000641463 2694 ntBASIC14.47□□□□□ -0.09
TRIM2Q9C040 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRIM2Q9C040 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM2Q9C040 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM2Q9C040 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM2Q9C040 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM2Q9C040 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM2Q9C040 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM2Q9C040 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM2Q9C040 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms