Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 AC127383.1-201ENST00000444697 1800 ntBASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
YIPF4Q9BSR8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 TMBIM7P-203ENST00000641617 1718 ntBASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 HLA-J-203ENST00000494367 1087 ntBASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AC138035.3-201ENST00000622706 2791 ntBASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
YIPF4Q9BSR8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
YIPF4Q9BSR8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms