Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.99■□□□□ 0.47
ARID3AQ99856 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.99■□□□□ 0.47
ARID3AQ99856 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
ARID3AQ99856 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.99■□□□□ 0.47
ARID3AQ99856 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.99■□□□□ 0.47
ARID3AQ99856 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.99■□□□□ 0.47
ARID3AQ99856 AC096734.2-201ENST00000562054 433 ntBASIC17.99■□□□□ 0.47
ARID3AQ99856 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.99■□□□□ 0.47
ARID3AQ99856 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.99■□□□□ 0.47
ARID3AQ99856 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.99■□□□□ 0.47
ARID3AQ99856 AP005117.1-202ENST00000581724 1908 ntBASIC17.99■□□□□ 0.47
ARID3AQ99856 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.99■□□□□ 0.47
ARID3AQ99856 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.99■□□□□ 0.47
ARID3AQ99856 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.99■□□□□ 0.47
ARID3AQ99856 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ARID3AQ99856 CICP8-201ENST00000455800 2813 ntBASIC17.99■□□□□ 0.47
ARID3AQ99856 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC17.98■□□□□ 0.47
ARID3AQ99856 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.98■□□□□ 0.47
ARID3AQ99856 AL512652.2-201ENST00000625156 1716 ntBASIC17.98■□□□□ 0.47
ARID3AQ99856 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ARID3AQ99856 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.98■□□□□ 0.47
ARID3AQ99856 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC17.98■□□□□ 0.47
ARID3AQ99856 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.98■□□□□ 0.47
ARID3AQ99856 MED15P5-201ENST00000423150 992 ntBASIC17.98■□□□□ 0.47
ARID3AQ99856 RHOQP3-201ENST00000437982 621 ntBASIC17.98■□□□□ 0.47
ARID3AQ99856 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ARID3AQ99856 AC087641.1-201ENST00000557561 1021 ntBASIC17.98■□□□□ 0.47
ARID3AQ99856 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ARID3AQ99856 AL671883.3-201ENST00000603274 991 ntBASIC17.98■□□□□ 0.47
ARID3AQ99856 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ARID3AQ99856 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ARID3AQ99856 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.98■□□□□ 0.47
ARID3AQ99856 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ARID3AQ99856 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ARID3AQ99856 AC005912.2-201ENST00000619492 2400 ntBASIC17.98■□□□□ 0.47
ARID3AQ99856 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.98■□□□□ 0.47
ARID3AQ99856 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ARID3AQ99856 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ARID3AQ99856 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ARID3AQ99856 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
ARID3AQ99856 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.97■□□□□ 0.47
ARID3AQ99856 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 AC006538.1-201ENST00000567905 1585 ntBASIC17.97■□□□□ 0.47
ARID3AQ99856 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.97■□□□□ 0.47
ARID3AQ99856 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 MIR574-201ENST00000385209 96 ntBASIC17.97■□□□□ 0.47
ARID3AQ99856 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.97■□□□□ 0.47
ARID3AQ99856 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.97■□□□□ 0.47
ARID3AQ99856 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
ARID3AQ99856 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.97■□□□□ 0.47
ARID3AQ99856 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.97■□□□□ 0.47
ARID3AQ99856 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.97■□□□□ 0.47
ARID3AQ99856 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.97■□□□□ 0.47
ARID3AQ99856 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.97■□□□□ 0.47
ARID3AQ99856 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.97■□□□□ 0.47
ARID3AQ99856 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 AC012569.1-201ENST00000591191 1524 ntBASIC17.97■□□□□ 0.47
ARID3AQ99856 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.97■□□□□ 0.47
ARID3AQ99856 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ARID3AQ99856 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ARID3AQ99856 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
ARID3AQ99856 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ARID3AQ99856 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.96■□□□□ 0.47
ARID3AQ99856 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms