Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 AC023908.3-201ENST00000564211 3047 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
MUC4Q99102 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
MUC4Q99102 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
MUC4Q99102 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
MUC4Q99102 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.5□□□□□ -0.57
MUC4Q99102 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.5□□□□□ -0.57
MUC4Q99102 AC105339.1-204ENST00000636249 355 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 AC084121.4-201ENST00000641598 221 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 AF228730.8-201ENST00000642140 221 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.5□□□□□ -0.57
MUC4Q99102 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
MUC4Q99102 CICP23-201ENST00000605013 2741 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 LINC00552-201ENST00000625151 2579 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.5□□□□□ -0.57
MUC4Q99102 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
MUC4Q99102 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.5□□□□□ -0.57
MUC4Q99102 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC11.5□□□□□ -0.57
MUC4Q99102 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 AC127383.1-201ENST00000444697 1800 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.5□□□□□ -0.57
MUC4Q99102 AC002472.2-201ENST00000442739 958 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 GAPDHP21-201ENST00000450301 1010 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 RN7SL589P-201ENST00000481268 310 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 AC069335.1-201ENST00000489972 472 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 AC010336.2-201ENST00000564226 506 ntBASIC11.5□□□□□ -0.57
MUC4Q99102 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.5□□□□□ -0.57
MUC4Q99102 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.5□□□□□ -0.57
MUC4Q99102 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.5□□□□□ -0.57
MUC4Q99102 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
MUC4Q99102 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MUC4Q99102 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.5□□□□□ -0.57
MUC4Q99102 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
MUC4Q99102 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
MUC4Q99102 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
MUC4Q99102 AC099063.4-201ENST00000641099 1602 ntBASIC11.49□□□□□ -0.57
MUC4Q99102 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.49□□□□□ -0.57
MUC4Q99102 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.49□□□□□ -0.57
MUC4Q99102 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 KRT8P37-201ENST00000451609 1420 ntBASIC11.49□□□□□ -0.57
MUC4Q99102 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.49□□□□□ -0.57
MUC4Q99102 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.49□□□□□ -0.57
MUC4Q99102 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MUC4Q99102 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.49□□□□□ -0.57
MUC4Q99102 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.49□□□□□ -0.57
MUC4Q99102 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.49□□□□□ -0.57
MUC4Q99102 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 PHKG1P2-201ENST00000457537 863 ntBASIC11.49□□□□□ -0.57
MUC4Q99102 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.49□□□□□ -0.57
MUC4Q99102 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
MUC4Q99102 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms