Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 AL691432.1-201ENST00000596308 1422 ntBASIC12.78□□□□□ -0.36
RAB40CQ96S21 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 AC018892.3-201ENST00000623986 2499 ntBASIC12.78□□□□□ -0.36
RAB40CQ96S21 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB40CQ96S21 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB40CQ96S21 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB40CQ96S21 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
RAB40CQ96S21 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB40CQ96S21 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
RAB40CQ96S21 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB40CQ96S21 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB40CQ96S21 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB40CQ96S21 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
RAB40CQ96S21 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB40CQ96S21 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB40CQ96S21 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
RAB40CQ96S21 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB40CQ96S21 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 FAAHP1-202ENST00000446499 1238 ntBASIC12.77□□□□□ -0.37
RAB40CQ96S21 FAM197Y8-203ENST00000450145 560 ntBASIC12.77□□□□□ -0.37
RAB40CQ96S21 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 RNPS1P1-201ENST00000507437 918 ntBASIC12.77□□□□□ -0.37
RAB40CQ96S21 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 AL356488.2-201ENST00000602755 427 ntBASIC12.77□□□□□ -0.37
RAB40CQ96S21 AL009183.1-201ENST00000603760 355 ntBASIC12.77□□□□□ -0.37
RAB40CQ96S21 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB40CQ96S21 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB40CQ96S21 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms