Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 MIR6069-201ENST00000620069 79 ntBASIC11.73□□□□□ -0.53
RNF183Q96D59 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.73□□□□□ -0.53
RNF183Q96D59 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.73□□□□□ -0.53
RNF183Q96D59 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.72□□□□□ -0.53
RNF183Q96D59 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.72□□□□□ -0.53
RNF183Q96D59 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.72□□□□□ -0.53
RNF183Q96D59 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RNF183Q96D59 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.72□□□□□ -0.53
RNF183Q96D59 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 AC092384.3-202ENST00000564646 2873 ntBASIC11.72□□□□□ -0.53
RNF183Q96D59 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.72□□□□□ -0.53
RNF183Q96D59 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.72□□□□□ -0.53
RNF183Q96D59 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.72□□□□□ -0.53
RNF183Q96D59 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 AC245100.5-201ENST00000452108 331 ntBASIC11.72□□□□□ -0.53
RNF183Q96D59 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.72□□□□□ -0.53
RNF183Q96D59 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.72□□□□□ -0.53
RNF183Q96D59 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.72□□□□□ -0.53
RNF183Q96D59 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 AL033527.5-202ENST00000641632 1098 ntBASIC11.72□□□□□ -0.53
RNF183Q96D59 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 AP002414.2-201ENST00000591780 3365 ntBASIC11.72□□□□□ -0.53
RNF183Q96D59 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 AL359183.1-201ENST00000623796 2132 ntBASIC11.72□□□□□ -0.53
RNF183Q96D59 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
RNF183Q96D59 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RNF183Q96D59 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RNF183Q96D59 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.71□□□□□ -0.53
RNF183Q96D59 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RNF183Q96D59 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.71□□□□□ -0.53
RNF183Q96D59 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.71□□□□□ -0.53
RNF183Q96D59 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
RNF183Q96D59 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
RNF183Q96D59 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RNF183Q96D59 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
RNF183Q96D59 AC015922.1-201ENST00000421102 1152 ntBASIC11.71□□□□□ -0.53
RNF183Q96D59 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.71□□□□□ -0.53
RNF183Q96D59 AC010336.2-201ENST00000564226 506 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms