Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 CDC14C-201ENST00000428251 1719 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC074338.1-201ENST00000416825 156 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AL353779.1-201ENST00000434793 351 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 API5-211ENST00000534695 560 ntTSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC023310.3-201ENST00000557027 670 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC100756.1-201ENST00000562736 682 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC138749.3-201ENST00000567691 622 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC027307.3-201ENST00000594262 1100 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC116165.1-201ENST00000611806 668 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AF228730.6-201ENST00000641497 218 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC084121.3-201ENST00000641716 218 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC105233.6-201ENST00000642093 218 ntBASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 AL161772.1-201ENST00000610494 4412 ntBASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
FNDC9Q8TBE3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
FNDC9Q8TBE3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
FNDC9Q8TBE3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms