Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 AC092127.1-201ENST00000567093 3455 ntBASIC15□□□□□ -0.01
SRFBP1Q8NEF9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 RNA5SP421-201ENST00000516864 134 ntBASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 AL844908.2-201ENST00000609461 460 ntBASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 AL390754.1-201ENST00000619088 582 ntBASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SRFBP1Q8NEF9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SRFBP1Q8NEF9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms