Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AC009477.1-201ENST00000452936 217 ntBASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AL512638.1-201ENST00000457493 794 ntBASIC13.75□□□□□ -0.21
CPEB3Q8NE35 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AC004890.2-204ENST00000481968 304 ntBASIC13.75□□□□□ -0.21
CPEB3Q8NE35 SDHAP3-202ENST00000515467 728 ntBASIC13.75□□□□□ -0.21
CPEB3Q8NE35 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AC009407.1-201ENST00000568958 598 ntBASIC13.75□□□□□ -0.21
CPEB3Q8NE35 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AL355385.1-201ENST00000606123 409 ntBASIC13.75□□□□□ -0.21
CPEB3Q8NE35 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AC127383.1-201ENST00000444697 1800 ntBASIC13.75□□□□□ -0.21
CPEB3Q8NE35 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AC090616.6-203ENST00000579186 1945 ntBASIC13.74□□□□□ -0.21
CPEB3Q8NE35 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AC136621.1-201ENST00000624017 2304 ntBASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AC093214.1-201ENST00000511688 1107 ntBASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 ZNF890P-202ENST00000530367 1156 ntBASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AF228730.6-201ENST00000641497 218 ntBASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AC084121.3-201ENST00000641716 218 ntBASIC13.74□□□□□ -0.21
CPEB3Q8NE35 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 AL122018.1-201ENST00000446607 2310 ntBASIC13.74□□□□□ -0.21
CPEB3Q8NE35 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CPEB3Q8NE35 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CPEB3Q8NE35 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms