Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 CNN2P11-201ENST00000429351 262 ntBASIC13.12□□□□□ -0.31
COMMD1Q8N668 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AL009183.1-201ENST00000603760 355 ntBASIC13.12□□□□□ -0.31
COMMD1Q8N668 AC021097.1-201ENST00000607902 574 ntBASIC13.12□□□□□ -0.31
COMMD1Q8N668 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
COMMD1Q8N668 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COMMD1Q8N668 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 LINC01144-201ENST00000626198 1710 ntBASIC13.11□□□□□ -0.31
COMMD1Q8N668 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 RPS8P6-201ENST00000426177 609 ntBASIC13.11□□□□□ -0.31
COMMD1Q8N668 AL671277.1-201ENST00000429656 993 ntBASIC13.11□□□□□ -0.31
COMMD1Q8N668 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 AC092183.1-201ENST00000469884 875 ntBASIC13.11□□□□□ -0.31
COMMD1Q8N668 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 RARRES2P8-201ENST00000566335 367 ntBASIC13.11□□□□□ -0.31
COMMD1Q8N668 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 AL031055.1-201ENST00000606362 631 ntBASIC13.11□□□□□ -0.31
COMMD1Q8N668 AC026120.1-201ENST00000611536 926 ntBASIC13.11□□□□□ -0.31
COMMD1Q8N668 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.11□□□□□ -0.31
COMMD1Q8N668 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD1Q8N668 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms