Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 AP001582.1-201ENST00000525856 295 ntBASIC16.07■□□□□ 0.16
SIX5Q8N196 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.07■□□□□ 0.16
SIX5Q8N196 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 AL365209.1-201ENST00000624418 6473 ntBASIC16.07■□□□□ 0.16
SIX5Q8N196 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 AC008741.2-201ENST00000612792 3115 ntBASIC16.06■□□□□ 0.16
SIX5Q8N196 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
SIX5Q8N196 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.06■□□□□ 0.16
SIX5Q8N196 AC022211.2-201ENST00000585075 2527 ntBASIC16.06■□□□□ 0.16
SIX5Q8N196 AC007326.2-201ENST00000624224 7579 ntBASIC16.06■□□□□ 0.16
SIX5Q8N196 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SIX5Q8N196 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.06■□□□□ 0.16
SIX5Q8N196 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.06■□□□□ 0.16
SIX5Q8N196 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.06■□□□□ 0.16
SIX5Q8N196 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.06■□□□□ 0.16
SIX5Q8N196 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.06■□□□□ 0.16
SIX5Q8N196 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.06■□□□□ 0.16
SIX5Q8N196 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.06■□□□□ 0.16
SIX5Q8N196 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 BX284668.4-201ENST00000453917 508 ntBASIC16.06■□□□□ 0.16
SIX5Q8N196 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.06■□□□□ 0.16
SIX5Q8N196 HIST2H2BC-201ENST00000498492 580 ntBASIC16.06■□□□□ 0.16
SIX5Q8N196 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.06■□□□□ 0.16
SIX5Q8N196 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.06■□□□□ 0.16
SIX5Q8N196 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.06■□□□□ 0.16
SIX5Q8N196 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.06■□□□□ 0.16
SIX5Q8N196 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.06■□□□□ 0.16
SIX5Q8N196 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
SIX5Q8N196 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.06■□□□□ 0.16
SIX5Q8N196 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SIX5Q8N196 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SIX5Q8N196 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.05■□□□□ 0.16
SIX5Q8N196 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 GGT3P-204ENST00000453783 1664 ntBASIC16.05■□□□□ 0.16
SIX5Q8N196 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SIX5Q8N196 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.05■□□□□ 0.16
SIX5Q8N196 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms