Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 AC092506.1-202ENST00000401022 528 ntBASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 MIR1202-201ENST00000408529 83 ntBASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 CALR4P-201ENST00000431943 946 ntBASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 AC015910.1-201ENST00000579400 975 ntBASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEFF1Q8IYR6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AL590640.2-201ENST00000457038 527 ntBASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 AL008638.5-201ENST00000623814 1298 ntBASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEFF1Q8IYR6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms