Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
NUDCD3Q8IVD9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.64■□□□□ 0.09
NUDCD3Q8IVD9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 AC025580.3-201ENST00000617932 1424 ntBASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 GRK6P1-201ENST00000400595 1711 ntBASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NUDCD3Q8IVD9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 PHKG1P2-201ENST00000457537 863 ntBASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 AL138918.1-201ENST00000568306 659 ntBASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 AC073389.1-201ENST00000595595 795 ntBASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.62■□□□□ 0.09
NUDCD3Q8IVD9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms