Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 AL139424.1-201ENST00000607572 797 ntBASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD2Q8IV50 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 TSSC2-201ENST00000450217 709 ntBASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 AF228730.7-201ENST00000641842 219 ntBASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 AC015909.5-201ENST00000624336 2266 ntBASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 AC087386.2-201ENST00000623212 4637 ntBASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 AC083964.2-201ENST00000623988 2396 ntBASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD2Q8IV50 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms