Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AC073957.3-201ENST00000609998 6758 ntBASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AL645929.1-201ENST00000420084 975 ntBASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AC092597.1-201ENST00000487352 616 ntBASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AC063952.2-201ENST00000498792 1227 ntBASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AL049597.2-201ENST00000565575 961 ntBASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AC092135.3-201ENST00000624151 1846 ntBASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 AC005622.1-201ENST00000636801 1703 ntBASIC12.23□□□□□ -0.45
KCNIP4Q6PIL6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 AC243591.1-201ENST00000452967 1364 ntBASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 ZBED1P1-201ENST00000502364 1930 ntBASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 RN7SL850P-201ENST00000579959 291 ntBASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 TERC-201ENST00000602385 541 ntBASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 AC006011.2-201ENST00000621313 1158 ntBASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP4Q6PIL6 Z83836.1-201ENST00000624605 1642 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms