Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.33□□□□□ -0.12
NIPAL3Q6P499 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.32□□□□□ -0.12
NIPAL3Q6P499 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 METTL21AP1-201ENST00000438852 635 ntBASIC14.32□□□□□ -0.12
NIPAL3Q6P499 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 AL139010.1-201ENST00000454878 894 ntBASIC14.32□□□□□ -0.12
NIPAL3Q6P499 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 AC243562.2-201ENST00000561247 970 ntBASIC14.32□□□□□ -0.12
NIPAL3Q6P499 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 KRT8P44-201ENST00000441609 1350 ntBASIC14.32□□□□□ -0.12
NIPAL3Q6P499 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL3Q6P499 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 LINC01101-201ENST00000622953 1884 ntBASIC14.31□□□□□ -0.12
NIPAL3Q6P499 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AC069262.1-201ENST00000539058 672 ntBASIC14.31□□□□□ -0.12
NIPAL3Q6P499 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AC025678.2-201ENST00000562061 970 ntBASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 KRT18P28-201ENST00000453838 1332 ntBASIC14.31□□□□□ -0.12
NIPAL3Q6P499 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms