Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 PUDPP3-201ENST00000445368 636 ntBASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AL031713.1-201ENST00000564813 661 ntBASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AL109837.1-201ENST00000603272 613 ntBASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AC011247.3-201ENST00000603297 438 ntBASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
HIST2H2BCQ6DN03 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 AP003398.1-201ENST00000531124 318 ntBASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 AC107464.3-201ENST00000609172 737 ntBASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HIST2H2BCQ6DN03 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST2H2BCQ6DN03 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H2BCQ6DN03 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H2BCQ6DN03 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H2BCQ6DN03 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H2BCQ6DN03 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST2H2BCQ6DN03 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms